Data Management

Metadata

• Towed Array: Stored \\PICCRPNAS\CRP3\_PAM_Metadata

Detection_Logs contains the following folder structure:

1_Field_SQLite_Databases

(SQLite databases collected via PAMGuard using the Logger Form Module. Depending on the cruise they are broken down by day, leg, or cruise. This is there most raw form.)

2_Compiled_CSV_Excel

(R-script compiled all the databases by sheet into CSV files and there is single Excel file containing all the data except the gps CSV. The Excel file used to keep track of edits from the field collected data.)

3_Finalized_EncounterTime-Species

(Edited Excel file containing only the towed array information, edited encounter start/end times, and finalized species codes.)

• DASBR: Stored \\PICCRPNAS\CRP3\_PAM_Metadata

Deployment_Logs folder contains an Excel file by cruise of each DASBR deployment, the makeup of each drift, and time in water.

Drift_Tracks folder contains two folders: Original (original track info from the instrument) & Formatted_For_PAMPal (columns edited to be ingesting into the R package PAMpal).

Tethys_Deployment_Files contains Excel files of deployment information and gps tracks formatted for Tethys.

Summary of all sampling information by cruise.

• Sonobuoy:

• HARP:

• LLharp:

• Glider:

Raw Data

• Acoustic recordings are housed on several internal servers at PIFSC. Location of data can be found here along with a list of available servers and their model information.

Focus Species Project Information

• False killer whale

• Sperm whale

Species Examples (Pacific Island Region)

Common Name	Scientific Name	PIFSC Code#	Acoustic Signals
Pantropical spotted dolphin	Stenella attenuata	002	Example
Striped dolphin	Stenella coeruleoalba	013	[Example]
Rough-toothed dolphin	Steno bredanensis	015	Example
Bottlenose dolphin	Tursiops truncatus	018	[Example]
Risso’s dolphin	Grampus griseus	021	Example
Fraser’s dolphin	Lagenodelphis hosei	026	Example
Melon-headed whale	Peponocephala electra	031	Example
Pygmy killer whale	Feresa attenuata	032	Example
False killer whale	Pseudorca crassidens	033	Example
Short-finned pilot whale	Globicephala macrorhynchus	036	Example
Killer whale	Orcinus orca	037	Example
Sperm whale	Physeter macrocephalus	046	Example
Pygmy sperm whale	Kogia breviceps	047	[Example]
Dwarf sperm whale	Kogia sima	048	Example
Blainville’s beaked whale	Mesoplodon densirostris	059	Example
Goose-beaked whale (Cuvier’s)	Ziphius cavirostris	061	Example
Longman’s beaked whale	Indopacetus pacificus	065	Example
Common minke whale	Balaenoptera acutorostrata	071	[Example]
Bryde’s whale	Balaenoptera edeni	072	Example
Sei whale	Balaenoptera borealis	073	[Example]
Fin whale	Balaenoptera physalus	074	[Example]
Blue whale	Balaenoptera musculus	075	[Example]
Humpback whale	Megaptera novaeangliae	076	[Example]
Kogia	Kogia sp.	080	Example
Cross Seamount beaked whale	BWC	049 (Unknown)	Example